Plot Scatter-Matching of Universal Negative

This function generates scatter plots for matching positive and negative expression data, selected based on scatter parameters gates.

Usage

scatter.match.plot(
  pos.expr.data,
  neg.expr.data,
  fluor.name,
  scatter.param,
  asp,
  color.palette = "rainbow"
)

Arguments

pos.expr.data

A matrix containing the positive expression data.

neg.expr.data

A matrix containing the negative expression data.

fluor.name

A character string specifying the fluorophore name.

scatter.param

A character vector specifying the scatter parameters.

asp

The AutoSpectral parameter list. Prepare using get.autospectral.param

color.palette

Optional character string defining the viridis color palette to be used for the fluorophore traces. Default is rainbow, which will be similar to FlowJo or SpectroFlo. Other pptions are the viridis color options: magma, inferno, plasma, viridis, cividis, rocket, mako and turbo.

Value

None. The function saves the generated scatter plot to a file.