Gate Definition Plot

This function plots the gate during the definition step, including boundaries and regions.

gate.define.plot(
  samp,
  gate.data,
  gate.marker,
  gate.bound,
  gate.region,
  gate.population,
  scatter.and.channel.label,
  asp
)

Arguments

samp

Sample identifier.

gate.data

Matrix containing gate data points.

gate.marker

Vector containing gate marker names.

gate.bound

List containing gate boundary information.

gate.region

List containing gate region information.

gate.population

List containing gate population information.

scatter.and.channel.label

Named vector mapping scatter and channel labels.

asp

The AutoSpectral parameter list. Prepare using get.autospectral.param

Value

Saves the plot as a JPEG file in the specified directory.